Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | APR48_39420 | Not Available | Positive | 8495209 - 8496138 | 32934.8 |
| abc transporter permease | APR48_39425 | Not Available | Positive | 8496142 - 8497206 | 38460.1 |
| abc transporter permease | APR48_39430 | Not Available | Positive | 8497272 - 8498603 | 48359.1 |
| abc transporter atp-binding protein | APR48_39435 | Not Available | Positive | 8498752 - 8499564 | 29725.1 |
| amp-dependent synthetase | APR48_39440 | Not Available | Positive | 8499899 - 8501146 | 44884.6 |
| hypothetical protein | APR48_39445 | Not Available | Negative | 8501137 - 8502174 | 36428.6 |
| citrate synthase | APR48_39450 | Not Available | Negative | 8502254 - 8503366 | 39015.8 |
| hypothetical protein | APR48_39460 | Not Available | Negative | 8504107 - 8505822 | 64484.0 |
| hypothetical protein | APR48_39465 | Not Available | Negative | 8505819 - 8508902 | 113113.0 |
| hypothetical protein | APR48_39470 | Not Available | Negative | 8509130 - 8509894 | 28281.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
