Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| copg family transcriptional regulator | APR48_39360 | Not Available | Positive | 8483200 - 8483478 | 10234.0 |
| plasmid stabilization protein | APR48_39365 | Not Available | Positive | 8483478 - 8483753 | 10541.7 |
| hypothetical protein | APR48_39370 | Not Available | Negative | 8484304 - 8485392 | 39783.7 |
| feruloyl esterase | APR48_39385 | Not Available | Negative | 8486545 - 8488137 | 56655.8 |
| 3-hydroxybutyryl-coa dehydrogenase | APR48_39390 | Not Available | Negative | 8488445 - 8489332 | 31915.4 |
| hypothetical protein | APR48_39395 | Not Available | Positive | 8489663 - 8491096 | 52857.0 |
| hypothetical protein | APR48_39400 | Not Available | Negative | 8491109 - 8491579 | 16687.0 |
| crp/fnr family transcriptional regulator | APR48_39405 | Not Available | Negative | 8491576 - 8492364 | 28533.4 |
| long-chain fatty acid--coa ligase | APR48_39410 | Not Available | Positive | 8492450 - 8494423 | 71703.9 |
| abc transporter atp-binding protein | APR48_39415 | Not Available | Positive | 8494425 - 8495207 | 29127.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
