Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_39310 | Not Available | Negative | 8468939 - 8469790 | 29455.0 |
| hypothetical protein | APR48_39315 | Not Available | Positive | 8470325 - 8472610 | 80551.8 |
| hypothetical protein | APR48_39320 | Not Available | Positive | 8472697 - 8473689 | 35002.5 |
| hypothetical protein | APR48_39325 | Not Available | Positive | 8473818 - 8475827 | 73591.4 |
| fis family transcriptional regulator | APR48_39330 | Not Available | Positive | 8475820 - 8477175 | 50162.1 |
| hypothetical protein | APR48_39335 | Not Available | Positive | 8477372 - 8478055 | 25163.1 |
| cytochrome c | APR48_39340 | Not Available | Negative | 8478135 - 8479010 | 31077.4 |
| cytochrome c | APR48_39345 | Not Available | Positive | 8479205 - 8479531 | 11408.8 |
| cytochrome c oxidase subunit ii | APR48_39350 | Not Available | Positive | 8479528 - 8480496 | 35161.4 |
| cytochrome b | APR48_39355 | Not Available | Positive | 8480505 - 8483030 | 91642.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
