Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-ketocyclohexanecarboxyl-coa hydrolase | APR48_39145 | Not Available | Positive | 8429032 - 8429844 | 28872.3 |
| hypothetical protein | APR48_39150 | Not Available | Positive | 8429869 - 8431818 | 69700.6 |
| hypothetical protein | APR48_39155 | Not Available | Negative | 8431832 - 8432047 | 7616.25 |
| hydrolase | APR48_39165 | Not Available | Negative | 8432500 - 8433570 | 39197.1 |
| pbsx family transcriptional regulator | APR48_39170 | Not Available | Positive | 8433711 - 8436212 | 91025.8 |
| methyltransferase | APR48_39175 | Not Available | Positive | 8436261 - 8436968 | 26061.1 |
| hypothetical protein | APR48_39180 | Not Available | Positive | 8437215 - 8438837 | 55527.6 |
| abc transporter permease | APR48_39185 | Not Available | Negative | 8438993 - 8441650 | 91979.0 |
| serine hydrolase | APR48_39190 | Not Available | Positive | 8441761 - 8443125 | 47874.2 |
| hypothetical protein | APR48_39195 | Not Available | Negative | 8443122 - 8443676 | 20339.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
