Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enoyl-coa hydratase | APR48_39095 | Not Available | Negative | 8419009 - 8419788 | 27782.4 |
| 4-hydroxybutyrate dehydrogenase | APR48_39100 | Not Available | Positive | 8420063 - 8421202 | 39399.0 |
| laci family transcriptional regulator | APR48_39105 | Not Available | Positive | 8421233 - 8422210 | 34244.5 |
| hypothetical protein | APR48_39110 | Not Available | Positive | 8422268 - 8423260 | 35732.0 |
| amidohydrolase | APR48_39115 | Not Available | Positive | 8423257 - 8424189 | 34031.4 |
| amidohydrolase | APR48_39120 | Not Available | Positive | 8424231 - 8424734 | 17946.6 |
| l-dehydroascorbate transporter large permease subunit | APR48_39125 | Not Available | Positive | 8424763 - 8426040 | 44791.2 |
| hypothetical protein | APR48_39130 | Not Available | Negative | 8426066 - 8426554 | 17108.8 |
| lysr family transcriptional regulator | APR48_39135 | Not Available | Negative | 8426589 - 8427506 | 33438.2 |
| aminotransferase | APR48_39140 | Not Available | Positive | 8427683 - 8429029 | 48899.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
