Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transporter | APR48_39045 | Not Available | Negative | 8408480 - 8409328 | 29695.9 |
| short-chain dehydrogenase | APR48_39050 | Not Available | Negative | 8409388 - 8410170 | 27351.1 |
| electron transfer flavoprotein-ubiquinone oxidoreductase | APR48_39055 | Not Available | Positive | 8410309 - 8412012 | 62177.4 |
| hypothetical protein | APR48_39060 | Not Available | Negative | 8412144 - 8413211 | 39214.5 |
| dna-binding protein | APR48_39065 | Not Available | Negative | 8413583 - 8414077 | 17248.9 |
| lysr family transcriptional regulator | APR48_39070 | Not Available | Negative | 8414266 - 8414676 | 14690.5 |
| lysr family transcriptional regulator | APR48_39075 | Not Available | Positive | 8414861 - 8415787 | 34519.6 |
| thioesterase | APR48_39080 | Not Available | Negative | 8415775 - 8416683 | 33210.1 |
| abc transporter substrate-binding protein | APR48_39085 | Not Available | Negative | 8416712 - 8417710 | 34678.8 |
| coa-transferase | APR48_39090 | Not Available | Negative | 8417747 - 8418925 | 41737.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
