Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidylprolyl isomerase | APR48_38995 | Not Available | Negative | 8398521 - 8398931 | 14330.2 |
| ethanolamine permease | APR48_39000 | Not Available | Positive | 8399062 - 8400489 | 50431.3 |
| ethanolamine ammonia-lyase | APR48_39005 | Not Available | Positive | 8400497 - 8401891 | 49852.8 |
| ethanolamine ammonia-lyase | APR48_39010 | Not Available | Positive | 8401888 - 8402673 | 27778.2 |
| alkylhydroperoxidase | APR48_39015 | Not Available | Positive | 8402724 - 8403302 | 21756.2 |
| sulfatase | APR48_39020 | Not Available | Negative | 8403333 - 8405087 | 64349.3 |
| phosphoesterase | APR48_39025 | Not Available | Negative | 8405145 - 8405843 | 25568.4 |
| two-component system response regulator | APR48_39030 | Not Available | Positive | 8406008 - 8406676 | 24583.6 |
| histidine kinase | APR48_39035 | Not Available | Positive | 8406680 - 8408044 | 50121.5 |
| thioesterase | APR48_39040 | Not Available | Negative | 8408061 - 8408483 | 15996.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
