Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_38940 | Not Available | Negative | 8381711 - 8382148 | 15609.6 |
| phosphoribosylformylglycinamidine synthase | APR48_38945 | Not Available | Negative | 8382499 - 8386539 | 143803.0 |
| methionine aminopeptidase | APR48_38950 | Not Available | Positive | 8386725 - 8387549 | 29930.0 |
| protein-pii uridylyltransferase | APR48_38955 | Not Available | Positive | 8387581 - 8390187 | 98002.7 |
| diguanylate cyclase | APR48_38960 | Not Available | Positive | 8390303 - 8391322 | 36104.9 |
| hypothetical protein | APR48_38965 | Not Available | Positive | 8391327 - 8393351 | 72153.4 |
| hypothetical protein | APR48_38970 | Not Available | Positive | 8393679 - 8394152 | 17233.3 |
| poly(3-hydroxyalkanoate) synthetase | APR48_38980 | Not Available | Positive | 8394870 - 8395661 | 28690.7 |
| glucan biosynthesis protein d | APR48_38985 | Not Available | Positive | 8395984 - 8397582 | 58968.8 |
| oxidoreductase | APR48_38990 | Not Available | Positive | 8397756 - 8398517 | 26378.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
