Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetate kinase | APR48_38890 | Not Available | Negative | 8371447 - 8372637 | 41278.3 |
| sulfoacetaldehyde acetyltransferase | APR48_38895 | Not Available | Negative | 8372654 - 8374465 | 65514.0 |
| iclr family transcriptional regulator | APR48_38900 | Not Available | Positive | 8374650 - 8375471 | 29558.0 |
| arac family transcriptional regulator | APR48_38905 | Not Available | Positive | 8375816 - 8376871 | 39378.4 |
| hypothetical protein | APR48_38910 | Not Available | Positive | 8376916 - 8378439 | 55845.0 |
| peptide methionine sulfoxide reductase | APR48_38915 | Not Available | Positive | 8378436 - 8378849 | 14952.5 |
| septation protein a | APR48_38920 | Not Available | Positive | 8378892 - 8379437 | 20487.9 |
| bola family transcriptional regulator | APR48_38925 | Not Available | Positive | 8379440 - 8379724 | 9913.97 |
| peptidylprolyl isomerase | APR48_38930 | Not Available | Positive | 8379860 - 8380645 | 28947.9 |
| hypothetical protein | APR48_38935 | Not Available | Positive | 8380759 - 8381700 | 34424.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
