Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphate acetyltransferase | APR48_38840 | Not Available | Positive | 8360041 - 8360997 | 32498.8 |
| gcn5 family acetyltransferase | APR48_38845 | Not Available | Positive | 8361007 - 8361462 | 16475.9 |
| alpha/beta hydrolase | APR48_38850 | Not Available | Negative | 8361453 - 8362106 | 23196.5 |
| gluconolaconase | APR48_38855 | Not Available | Positive | 8362217 - 8363146 | 32467.4 |
| hypothetical protein | APR48_38860 | Not Available | Positive | 8363464 - 8364843 | 48823.8 |
| hypothetical protein | APR48_38865 | Not Available | Negative | 8364911 - 8365666 | 28192.5 |
| dmso reductase | APR48_38870 | Not Available | Negative | 8365773 - 8366705 | 33569.1 |
| hypothetical protein | APR48_38875 | Not Available | Negative | 8366711 - 8367337 | 22974.1 |
| formate dehydrogenase | APR48_38880 | Not Available | Negative | 8367487 - 8370426 | 108745.0 |
| transcriptional regulator | APR48_38885 | Not Available | Positive | 8370509 - 8371450 | 33617.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
