Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein ftsl | APR48_38775 | Not Available | Positive | 8349027 - 8349392 | 13460.5 |
| cell division protein | APR48_38780 | Not Available | Positive | 8349389 - 8351137 | 63606.7 |
| udp-n-acetylmuramoylalanyl-d-glutamate--2, 6-diaminopimelate ligase | APR48_38785 | Not Available | Positive | 8351140 - 8352696 | 54288.7 |
| udp-n-acetylmuramoylalanyl-d-glutamyl-2, 6-diaminopimelate--d-alanyl-d-alanine ligase | APR48_38790 | Not Available | Positive | 8352693 - 8354153 | 50880.6 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | APR48_38795 | Not Available | Positive | 8354176 - 8355354 | 43463.2 |
| hypothetical protein | APR48_38810 | Not Available | Negative | 8356892 - 8357374 | 17192.2 |
| nad-dependent protein deacetylase | APR48_38815 | Not Available | Negative | 8357587 - 8358297 | 26191.9 |
| hypothetical protein | APR48_38820 | Not Available | Positive | 8358463 - 8359299 | 30258.3 |
| Trna-arg | Not Available | Not Available | Positive | 8359301 - 8359377 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 8359470 - 8359546 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
