Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| recombinase xerc | APR48_38725 | Not Available | Positive | 8337178 - 8338224 | 38040.3 |
| 23s rrna methyltransferase | APR48_38730 | Not Available | Positive | 8338221 - 8339444 | 44182.7 |
| cobalamin biosynthesis protein cobw | APR48_38735 | Not Available | Positive | 8339566 - 8340618 | 39552.1 |
| hypothetical protein | APR48_38740 | Not Available | Negative | 8340794 - 8342275 | 52346.2 |
| conjugal transfer protein trar | APR48_38745 | Not Available | Positive | 8343061 - 8343639 | 21549.8 |
| hypothetical protein | APR48_38750 | Not Available | Positive | 8343686 - 8345347 | 59526.2 |
| atp-dependent protease subunit hslv | APR48_38755 | Not Available | Positive | 8345406 - 8345951 | 19489.4 |
| atp-dependent protease atp-binding subunit hslu | APR48_38760 | Not Available | Positive | 8345963 - 8347285 | 48922.7 |
| division/cell wall cluster transcriptional repressor mraz | APR48_38765 | Not Available | Positive | 8347558 - 8347986 | 15868.1 |
| ribosomal rna small subunit methyltransferase h | APR48_38770 | Not Available | Positive | 8347995 - 8348918 | 33540.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
