Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pa-phosphatase | APR48_38625 | Not Available | Positive | 8317089 - 8317886 | 28288.0 |
| l-asparaginase | APR48_38630 | Not Available | Negative | 8317966 - 8319036 | 37636.2 |
| tetr family transcriptional regulator | APR48_38635 | Not Available | Positive | 8319243 - 8319878 | 23627.7 |
| nad(p)h dehydrogenase | APR48_38640 | Not Available | Positive | 8320005 - 8320592 | 22394.4 |
| amidohydrolase | APR48_38645 | Not Available | Positive | 8320589 - 8321881 | 46614.9 |
| creatinine amidohydrolase | APR48_38650 | Not Available | Positive | 8321921 - 8322784 | 31301.5 |
| abc transporter substrate-binding protein | APR48_38655 | Not Available | Positive | 8322850 - 8323830 | 35472.7 |
| nitrate/sulfonate/bicarbonate abc transporter atp-binding protein | APR48_38660 | Not Available | Positive | 8323844 - 8324674 | 30417.2 |
| abc transporter atp-binding protein | APR48_38665 | Not Available | Positive | 8324671 - 8325474 | 28982.6 |
| fad-binding protein | APR48_38670 | Not Available | Positive | 8325482 - 8326861 | 49770.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
