Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enoyl-coa hydratase | APR48_38575 | Not Available | Positive | 8307045 - 8307854 | 28661.1 |
| hypothetical protein | APR48_38580 | Not Available | Positive | 8307895 - 8309613 | 58274.7 |
| amidohydrolase | APR48_38585 | Not Available | Negative | 8309630 - 8311354 | 63643.2 |
| c4-dicarboxylate abc transporter | APR48_38590 | Not Available | Negative | 8311372 - 8312376 | 34830.4 |
| hypothetical protein | APR48_38595 | Not Available | Positive | 8312539 - 8313588 | 36544.2 |
| hypothetical protein | APR48_38600 | Not Available | Negative | 8313607 - 8313960 | 12950.5 |
| hypothetical protein | APR48_38605 | Not Available | Negative | 8314189 - 8314509 | 11216.6 |
| lysr family transcriptional regulator | APR48_38610 | Not Available | Negative | 8314640 - 8315533 | 32650.2 |
| hypothetical protein | APR48_38615 | Not Available | Positive | 8315759 - 8316013 | 9425.03 |
| oxidoreductase | APR48_38620 | Not Available | Positive | 8316051 - 8316785 | 25754.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
