Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ubiquinol-cytochrome c reductase iron-sulfur subunit | APR48_38525 | Not Available | Negative | 8285897 - 8286514 | 21990.3 |
| hypothetical protein | APR48_38530 | Not Available | Negative | 8286706 - 8287407 | 25365.8 |
| hypothetical protein | APR48_38535 | Not Available | Positive | 8288865 - 8291969 | 113928.0 |
| capsular biosynthesis protein | APR48_38540 | Not Available | Negative | 8292138 - 8294183 | 73901.9 |
| tyrosine protein kinase | APR48_38545 | Not Available | Negative | 8294364 - 8296622 | 81791.5 |
| atp-dependent dna helicase | APR48_38550 | Not Available | Positive | 8298172 - 8302536 | 158084.0 |
| hypothetical protein | APR48_38555 | Not Available | Positive | 8302653 - 8303261 | 21685.5 |
| hypothetical protein | APR48_38560 | Not Available | Negative | 8303258 - 8303971 | 26718.9 |
| c4-dicarboxylate abc transporter | APR48_38565 | Not Available | Positive | 8304191 - 8305171 | 33854.8 |
| hypothetical protein | APR48_38570 | Not Available | Positive | 8305210 - 8307048 | 65556.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
