Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase | APR48_38470 | Not Available | Positive | 8270862 - 8272214 | 49304.6 |
| cellulose synthase | APR48_38475 | Not Available | Negative | 8272288 - 8276622 | 152562.0 |
| 1,4-d-glucanase | APR48_38480 | Not Available | Negative | 8276598 - 8277695 | 40393.2 |
| dde endonuclease | APR48_38490 | Not Available | Positive | 8278100 - 8279146 | 39803.8 |
| glucosamine-1-phosphate n-acetyltransferase | APR48_38495 | Not Available | Negative | 8279479 - 8280900 | 49385.2 |
| Trna-thr | Not Available | Not Available | Positive | 8282138 - 8282213 | Not Available |
| starvation protein b | APR48_38505 | Not Available | Negative | 8282288 - 8282875 | 20664.3 |
| glutathione s-transferase | APR48_38510 | Not Available | Negative | 8282921 - 8283532 | 23723.9 |
| cytochrome c | APR48_38515 | Not Available | Negative | 8283628 - 8284416 | 29172.8 |
| cytochrome b | APR48_38520 | Not Available | Negative | 8284446 - 8285882 | 53988.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
