Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter permease | APR48_38420 | Not Available | Positive | 8261257 - 8262333 | 39513.2 |
| homoserine dehydrogenase | APR48_38425 | Not Available | Positive | 8262598 - 8263953 | 46773.8 |
| sodium:solute symporter | APR48_38430 | Not Available | Negative | 8263961 - 8265469 | 52311.0 |
| hypothetical protein | APR48_38435 | Not Available | Negative | 8265466 - 8265765 | 10755.9 |
| xre family transcriptional regulator | APR48_38440 | Not Available | Positive | 8265969 - 8266505 | 18915.7 |
| hypothetical protein | APR48_38445 | Not Available | Positive | 8266519 - 8266887 | 13333.8 |
| aldo/keto reductase | APR48_38450 | Not Available | Positive | 8266884 - 8267942 | 39441.3 |
| dna-binding protein | APR48_38455 | Not Available | Negative | 8267957 - 8268367 | 14507.4 |
| phosphoglucomutase | APR48_38460 | Not Available | Negative | 8268381 - 8270051 | 59393.2 |
| hypothetical protein | APR48_38465 | Not Available | Positive | 8270319 - 8270654 | 12012.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
