Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_38365 | Not Available | Negative | 8246838 - 8248271 | 52960.8 |
| hypothetical protein | APR48_38370 | Not Available | Negative | 8248268 - 8251501 | 119416.0 |
| hypothetical protein | APR48_38375 | Not Available | Positive | 8252484 - 8253314 | 30855.8 |
| chromosome partitioning protein parb | APR48_38380 | Not Available | Positive | 8253415 - 8255463 | 73396.9 |
| thioesterase | APR48_38385 | Not Available | Positive | 8255672 - 8256121 | 16395.7 |
| hypothetical protein | APR48_38390 | Not Available | Positive | 8256705 - 8257010 | 11101.0 |
| peptide deformylase | APR48_38400 | Not Available | Positive | 8258101 - 8258640 | 19804.8 |
| gntr family transcriptional regulator | APR48_38405 | Not Available | Negative | 8258647 - 8259036 | 13450.1 |
| amino acid abc transporter substrate-binding protein | APR48_38410 | Not Available | Positive | 8259222 - 8260256 | 37064.0 |
| amino acid abc transporter permease | APR48_38415 | Not Available | Positive | 8260253 - 8261260 | 35741.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
