Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ornithine cyclodeaminase | APR48_38310 | Not Available | Negative | 8237037 - 8238005 | 33486.9 |
| serine/threonine protein phosphatase | APR48_38320 | Not Available | Positive | 8239069 - 8239938 | 33056.3 |
| lysr family transcriptional regulator | APR48_38325 | Not Available | Negative | 8239951 - 8240874 | 33425.6 |
| 3-oxoacyl-acp reductase | APR48_38330 | Not Available | Positive | 8241006 - 8241707 | 24941.0 |
| hypothetical protein | APR48_38335 | Not Available | Negative | 8241723 - 8241938 | 7779.55 |
| hypothetical protein | APR48_38340 | Not Available | Positive | 8242125 - 8242355 | 8656.42 |
| hypothetical protein | APR48_38345 | Not Available | Negative | 8242717 - 8243178 | 16850.2 |
| integrase | APR48_38350 | Not Available | Positive | 8244342 - 8245649 | 50057.0 |
| addiction module toxin rele | APR48_38355 | Not Available | Positive | 8245682 - 8246062 | 14079.1 |
| xre family transcriptional regulator | APR48_38360 | Not Available | Positive | 8246043 - 8246378 | 12002.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
