Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_38260 | Not Available | Positive | 8227683 - 8227910 | 8254.19 |
| hypothetical protein | APR48_38265 | Not Available | Negative | 8227933 - 8228661 | 26096.2 |
| arac family transcriptional regulator | APR48_38270 | Not Available | Negative | 8228674 - 8229657 | 35949.2 |
| isoquinoline 1-oxidoreductase | APR48_38275 | Not Available | Negative | 8229696 - 8230157 | 16235.6 |
| acylaldehyde oxidase | APR48_38280 | Not Available | Negative | 8230190 - 8232481 | 80442.5 |
| hypothetical protein | APR48_38285 | Not Available | Positive | 8233070 - 8234308 | 44896.3 |
| hypothetical protein | APR48_38290 | Not Available | Positive | 8234305 - 8234637 | 11727.9 |
| crp/fnr family transcriptional regulator | APR48_38295 | Not Available | Positive | 8234763 - 8235530 | 28160.7 |
| hypothetical protein | APR48_38300 | Not Available | Positive | 8236156 - 8236584 | 14551.1 |
| hypothetical protein | APR48_38305 | Not Available | Negative | 8236618 - 8236902 | 10005.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
