Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_38210 | Not Available | Positive | 8215131 - 8215616 | 16977.2 |
| hypothetical protein | APR48_38215 | Not Available | Positive | 8215880 - 8216689 | 29614.6 |
| hypothetical protein | APR48_38220 | Not Available | Negative | 8216805 - 8217320 | 18214.7 |
| 3-oxoadipate coa-transferase | APR48_38225 | Not Available | Positive | 8218126 - 8218827 | 24624.8 |
| 3-oxoadipate coa-transferase | APR48_38230 | Not Available | Positive | 8218824 - 8219471 | 22700.5 |
| beta-ketoadipyl coa thiolase | APR48_38235 | Not Available | Positive | 8219604 - 8220809 | 41654.3 |
| hypothetical protein | APR48_38240 | Not Available | Positive | 8221410 - 8223605 | 82083.7 |
| poly-beta-1,6-n-acetyl-d-glucosamine n-deacetylase pgab | APR48_38245 | Not Available | Positive | 8223626 - 8225725 | 76614.9 |
| poly-beta-1,6 n-acetyl-d-glucosamine synthase | APR48_38250 | Not Available | Positive | 8225722 - 8227029 | 50019.2 |
| hypothetical protein | APR48_38255 | Not Available | Positive | 8227040 - 8227612 | 21280.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
