Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_37880 | Not Available | Positive | 8135011 - 8135760 | 27274.5 |
| hypothetical protein | APR48_37885 | Not Available | Positive | 8135788 - 8136930 | 40028.8 |
| peptidase c14 | APR48_37890 | Not Available | Positive | 8136951 - 8138966 | 71508.2 |
| hypothetical protein | APR48_37895 | Not Available | Positive | 8138992 - 8139555 | 20486.3 |
| virulence protein scie type | APR48_37900 | Not Available | Positive | 8139552 - 8140409 | 31287.2 |
| type vi secretion system lysozyme | APR48_37905 | Not Available | Positive | 8140402 - 8140917 | 19319.3 |
| type vi secretion system protein impg | APR48_37910 | Not Available | Positive | 8140920 - 8142815 | 69817.1 |
| type vi secretion protein | APR48_37915 | Not Available | Positive | 8142779 - 8143894 | 41517.5 |
| clpv1 family t6ss atpase | APR48_37920 | Not Available | Positive | 8143935 - 8146631 | 98063.6 |
| hypothetical protein | APR48_37930 | Not Available | Positive | 8149497 - 8152091 | 93245.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
