Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_02970 | Not Available | Negative | 637689 - 638477 | 28755.4 |
| hypothetical protein | APR48_02975 | Not Available | Positive | 638631 - 639533 | 32620.3 |
| hypothetical protein | APR48_02980 | Not Available | Negative | 639546 - 640643 | 39387.7 |
| hypothetical protein | APR48_02985 | Not Available | Negative | 640643 - 641626 | 33703.8 |
| pyridoxal-5'-phosphate-dependent protein subunit beta | APR48_02990 | Not Available | Negative | 641736 - 642755 | 35501.0 |
| hypothetical protein | APR48_02995 | Not Available | Negative | 642760 - 643137 | 13545.1 |
| photosynthetic protein synthase i | APR48_03000 | Not Available | Negative | 643253 - 643867 | 22396.9 |
| peptidase | APR48_03005 | Not Available | Negative | 643864 - 645402 | 55819.7 |
| tonb-dependent receptor | APR48_03010 | Not Available | Negative | 645416 - 647635 | 79817.8 |
| hypothetical protein | APR48_03015 | Not Available | Negative | 647758 - 648129 | 12674.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
