Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| coa-binding protein | APR48_37775 | Not Available | Positive | 8112650 - 8114779 | 73666.0 |
| hypothetical protein | APR48_37780 | Not Available | Negative | 8114940 - 8115800 | 30049.5 |
| hypothetical protein | APR48_37790 | Not Available | Negative | 8116424 - 8116882 | 16924.6 |
| acyl-coa dehydrogenase | APR48_37795 | Not Available | Positive | 8116985 - 8118145 | 41493.7 |
| hypothetical protein | APR48_37800 | Not Available | Positive | 8118142 - 8119233 | 37598.8 |
| acetyl-coa acetyltransferase | APR48_37805 | Not Available | Positive | 8119247 - 8120455 | 43174.9 |
| hypothetical protein | APR48_37810 | Not Available | Negative | 8120494 - 8121276 | 28119.0 |
| hypothetical protein | APR48_37815 | Not Available | Positive | 8121475 - 8122350 | 29768.1 |
| abc transporter substrate-binding protein | APR48_37820 | Not Available | Positive | 8122395 - 8123366 | 34137.9 |
| hypothetical protein | APR48_37825 | Not Available | Positive | 8123396 - 8123824 | 15919.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
