Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_37715 | Not Available | Positive | 8100019 - 8100813 | 29019.1 |
| lysr family transcriptional regulator | APR48_37720 | Not Available | Negative | 8100854 - 8101807 | 35273.0 |
| 6-aminohexanoate hydrolase | APR48_37725 | Not Available | Positive | 8101937 - 8103391 | 50784.4 |
| plasmid stabilization protein | APR48_37730 | Not Available | Negative | 8103806 - 8104102 | 11207.6 |
| copg family transcriptional regulator | APR48_37735 | Not Available | Negative | 8104090 - 8104392 | 11415.3 |
| rna polymerase subunit sigma | APR48_37740 | Not Available | Positive | 8104844 - 8105353 | 19045.3 |
| hypothetical protein | APR48_37745 | Not Available | Positive | 8105350 - 8106366 | 37433.4 |
| tonb-dependent receptor | APR48_37750 | Not Available | Positive | 8106544 - 8109003 | 88705.5 |
| xre family transcriptional regulator | APR48_37760 | Not Available | Negative | 8109976 - 8110497 | 18504.2 |
| 3-oxoacyl-acp synthase | APR48_37770 | Not Available | Positive | 8111887 - 8112645 | 26571.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
