Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_37665 | Not Available | Positive | 8090328 - 8091173 | 31496.8 |
| hypothetical protein | APR48_37670 | Not Available | Negative | 8091595 - 8092098 | 17970.3 |
| 3-oxoacyl-acp reductase | APR48_37675 | Not Available | Negative | 8092152 - 8092973 | 28320.9 |
| 3-hydroxy-2-methylbutyryl-coa dehydrogenase | APR48_37680 | Not Available | Negative | 8092970 - 8093752 | 27286.9 |
| atp-dependent acyl-coa ligase | APR48_37685 | Not Available | Negative | 8093749 - 8095383 | 58624.8 |
| thiolase | APR48_37690 | Not Available | Negative | 8095388 - 8096623 | 42925.5 |
| abc transporter substrate-binding protein | APR48_37695 | Not Available | Negative | 8096766 - 8097767 | 35202.2 |
| hypothetical protein | APR48_37700 | Not Available | Negative | 8097824 - 8098528 | 26916.7 |
| 3-hydroxybutyrate dehydrogenase | APR48_37705 | Not Available | Positive | 8098744 - 8099517 | 27090.6 |
| hypothetical protein | APR48_37710 | Not Available | Positive | 8099615 - 8100025 | 15043.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
