Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine/threonine protein phosphatase | APR48_37560 | Not Available | Positive | 8067630 - 8068451 | 28949.0 |
| hypothetical protein | APR48_37565 | Not Available | Negative | 8068448 - 8069044 | 22800.9 |
| hcp1 family type vi secretion system effector | APR48_37570 | Not Available | Negative | 8069133 - 8069615 | 16952.9 |
| evpb family type vi secretion protein | APR48_37575 | Not Available | Negative | 8069749 - 8071242 | 55261.2 |
| hypothetical protein | APR48_37580 | Not Available | Negative | 8071293 - 8071811 | 18727.5 |
| type vi secretion protein impa | APR48_37585 | Not Available | Negative | 8071895 - 8072929 | 36059.8 |
| type vi secretion protein | APR48_37590 | Not Available | Positive | 8073001 - 8073543 | 19503.5 |
| hypothetical protein | APR48_37595 | Not Available | Negative | 8073573 - 8074769 | 42551.5 |
| type iv / vi secretion system, dotu | APR48_37600 | Not Available | Negative | 8074786 - 8076117 | 48356.9 |
| luxr family transcriptional regulator | APR48_37605 | Not Available | Positive | 8076366 - 8077055 | 24240.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
