Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_37500 | Not Available | Negative | 8053413 - 8054075 | 24066.1 |
| abc transporter | APR48_37505 | Not Available | Negative | 8054272 - 8055051 | 28422.5 |
| outer membrane lipid asymmetry maintenance protein mlad | APR48_37510 | Not Available | Negative | 8055048 - 8055536 | 17377.8 |
| abc transporter permease | APR48_37515 | Not Available | Negative | 8055577 - 8056359 | 27859.6 |
| abc transporter atp-binding protein | APR48_37520 | Not Available | Negative | 8056356 - 8057183 | 29670.7 |
| glutamate synthase | APR48_37525 | Not Available | Negative | 8057356 - 8058834 | 53704.1 |
| glutamate synthase | APR48_37530 | Not Available | Negative | 8058874 - 8063628 | 172678.0 |
| transposase | APR48_37535 | Not Available | Negative | 8063812 - 8064507 | 25856.9 |
| sam-dependent methyltransferase | APR48_37540 | Not Available | Negative | 8064660 - 8065568 | 33354.2 |
| peptidase | APR48_37545 | Not Available | Negative | 8065565 - 8066140 | 20727.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
