Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_37450 | Not Available | Negative | 8044693 - 8045052 | 13144.0 |
| hypothetical protein | APR48_37455 | Not Available | Negative | 8045061 - 8045915 | 30375.7 |
| histidinol dehydrogenase | APR48_37460 | Not Available | Negative | 8045987 - 8047357 | 47718.7 |
| atp phosphoribosyltransferase | APR48_37465 | Not Available | Negative | 8047381 - 8048022 | 23019.2 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | APR48_37470 | Not Available | Negative | 8048019 - 8049314 | 45880.9 |
| bola family transcriptional regulator | APR48_37475 | Not Available | Negative | 8049361 - 8049603 | 9049.73 |
| metal-dependent hydrolase | APR48_37480 | Not Available | Negative | 8049623 - 8050387 | 27924.9 |
| abc transporter atp-binding protein | APR48_37485 | Not Available | Negative | 8050384 - 8051331 | 34740.1 |
| serine hydrolase | APR48_37490 | Not Available | Positive | 8051492 - 8053075 | 56898.5 |
| anti-anti-sigma factor | APR48_37495 | Not Available | Negative | 8053103 - 8053378 | 9404.61 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
