Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite tricarboxylate transporter tctb | APR48_37395 | Not Available | Negative | 8026748 - 8027182 | 15112.0 |
| histidine kinase | APR48_37400 | Not Available | Negative | 8027371 - 8028930 | 56088.9 |
| two-component system response regulator | APR48_37405 | Not Available | Negative | 8028890 - 8029597 | 25564.9 |
| hypothetical protein | APR48_37410 | Not Available | Negative | 8029613 - 8030407 | 29103.9 |
| dna polymerase iii subunit alpha | APR48_37415 | Not Available | Positive | 8030537 - 8034055 | 130062.0 |
| hypothetical protein | APR48_37420 | Not Available | Positive | 8034219 - 8034575 | 12826.4 |
| dna helicase | APR48_37425 | Not Available | Negative | 8034550 - 8039769 | 191760.0 |
| hypothetical protein | APR48_37430 | Not Available | Negative | 8039766 - 8040992 | 43663.0 |
| cell division protein | APR48_37435 | Not Available | Negative | 8041060 - 8042790 | 62845.3 |
| histidinol-phosphate aminotransferase | APR48_37445 | Not Available | Negative | 8043566 - 8044657 | 39192.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
