Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_37345 | Not Available | Positive | 8017106 - 8017699 | 22030.7 |
| peptidase s45 | APR48_37350 | Not Available | Negative | 8017710 - 8020087 | 84725.1 |
| lysr family transcriptional regulator | APR48_37355 | Not Available | Negative | 8020266 - 8021219 | 34269.5 |
| quercetin 2,3-dioxygenase | APR48_37360 | Not Available | Positive | 8021380 - 8022081 | 25314.8 |
| doxx family protein | APR48_37365 | Not Available | Positive | 8022167 - 8022583 | 14461.1 |
| nadph-dependent fmn reductase | APR48_37370 | Not Available | Positive | 8022621 - 8023172 | 19367.7 |
| pirin | APR48_37375 | Not Available | Positive | 8023225 - 8024154 | 33105.6 |
| gnat family acetyltransferase | APR48_37380 | Not Available | Negative | 8024158 - 8024625 | 16879.3 |
| hypothetical protein | APR48_37385 | Not Available | Positive | 8024768 - 8025181 | 15396.7 |
| hypothetical protein | APR48_37390 | Not Available | Negative | 8025184 - 8026743 | 54889.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
