Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribulokinase | APR48_37245 | Not Available | Positive | 7987029 - 7988687 | 59018.4 |
| ribulose phosphate epimerase | APR48_37250 | Not Available | Positive | 7988674 - 7989372 | 25814.8 |
| deor family transcriptional regulator | APR48_37255 | Not Available | Positive | 7989460 - 7990239 | 27906.6 |
| methionine sulfoxide reductase a | APR48_37260 | Not Available | Negative | 7990250 - 7990954 | 25062.4 |
| hypothetical protein | APR48_37265 | Not Available | Negative | 7991075 - 7991329 | 8959.09 |
| molybdopterin-binding protein | APR48_37270 | Not Available | Negative | 7991438 - 7992229 | 29697.5 |
| cytochrome b | APR48_37275 | Not Available | Negative | 7992261 - 7992893 | 23313.1 |
| two-component system response regulator | APR48_37280 | Not Available | Positive | 7992991 - 7993716 | 27070.7 |
| histidine kinase | APR48_37285 | Not Available | Positive | 7993716 - 7995206 | 54059.4 |
| enoyl-coa hydratase | APR48_37290 | Not Available | Positive | 7995323 - 7996246 | 34031.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
