Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid abc transporter substrate-binding protein | APR48_37195 | Not Available | Positive | 7975973 - 7977085 | 39148.0 |
| hypothetical protein | APR48_37200 | Not Available | Positive | 7977096 - 7977995 | 31250.7 |
| fad-dependent oxidoreductase | APR48_37205 | Not Available | Positive | 7978024 - 7979196 | 42371.4 |
| fructose-bisphosphate aldolase | APR48_37210 | Not Available | Positive | 7979243 - 7980268 | 35876.3 |
| 4-hydroxybutyrate coa-transferase | APR48_37215 | Not Available | Positive | 7980317 - 7981612 | 46493.7 |
| hypothetical protein | APR48_37220 | Not Available | Negative | 7981620 - 7982516 | 30993.0 |
| transcriptional regulator | APR48_37225 | Not Available | Positive | 7982753 - 7983694 | 32524.3 |
| d-ribose transporter atp-binding protein | APR48_37230 | Not Available | Positive | 7983709 - 7985220 | 54900.2 |
| haloacid dehalogenase | APR48_37235 | Not Available | Positive | 7985217 - 7985954 | 25983.1 |
| ribose abc transporter permease | APR48_37240 | Not Available | Positive | 7985992 - 7987023 | 35238.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
