Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron reductase | APR48_37145 | Not Available | Negative | 7963499 - 7964353 | 31054.0 |
| cyclic peptide transporter | APR48_37150 | Not Available | Positive | 7964477 - 7966156 | 61028.8 |
| ornithine monooxygenase | APR48_37155 | Not Available | Positive | 7966204 - 7967514 | 48791.1 |
| hemolysin secretion protein d | APR48_37160 | Not Available | Positive | 7967677 - 7968861 | 41458.5 |
| macrolide abc transporter atp-binding protein | APR48_37165 | Not Available | Positive | 7968858 - 7970813 | 69200.7 |
| transporter | APR48_37170 | Not Available | Positive | 7970856 - 7972334 | 51448.1 |
| hypothetical protein | APR48_37175 | Not Available | Positive | 7972406 - 7972648 | 8645.19 |
| esterase | APR48_37180 | Not Available | Positive | 7972877 - 7973643 | 27700.2 |
| aldo/keto reductase | APR48_37185 | Not Available | Positive | 7973783 - 7974811 | 37327.4 |
| lysr family transcriptional regulator | APR48_37190 | Not Available | Negative | 7974818 - 7975717 | 33619.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
