Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome b | APR48_37085 | Not Available | Negative | 7941398 - 7941958 | 20950.0 |
| glycosyl transferase | APR48_37090 | Not Available | Positive | 7942087 - 7943577 | 54300.9 |
| aromatic ring-opening dioxygenase liga | APR48_37095 | Not Available | Negative | 7943568 - 7944398 | 30059.8 |
| lysr family transcriptional regulator | APR48_37100 | Not Available | Positive | 7944505 - 7945449 | 34420.8 |
| multidrug abc transporter atp-binding protein | APR48_37105 | Not Available | Positive | 7945477 - 7947381 | 68989.3 |
| glyoxalase | APR48_37110 | Not Available | Negative | 7947524 - 7947952 | 15400.3 |
| tetr family transcriptional regulator | APR48_37115 | Not Available | Positive | 7948034 - 7948654 | 21990.2 |
| hypothetical protein | APR48_37120 | Not Available | Negative | 7948663 - 7949103 | 16201.9 |
| ligand-gated channel protein | APR48_37135 | Not Available | Negative | 7960200 - 7962425 | 81677.9 |
| n(5)-hydroxyornithine transformylase pvdf | APR48_37140 | Not Available | Negative | 7962559 - 7963398 | 31192.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
