Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine oxidase | APR48_36935 | Not Available | Negative | 7906664 - 7907749 | 38840.2 |
| phosphomethylpyrimidine kinase | APR48_36940 | Not Available | Positive | 7907794 - 7908648 | 29047.3 |
| allantoin permease | APR48_36945 | Not Available | Negative | 7908587 - 7909927 | 46618.6 |
| guanylate cyclase | APR48_36950 | Not Available | Positive | 7910206 - 7912140 | 70876.5 |
| vanillate o-demethylase oxidoreductase | APR48_36955 | Not Available | Negative | 7912137 - 7913111 | 34139.0 |
| phenoxybenzoate dioxygenase | APR48_36960 | Not Available | Negative | 7913108 - 7914334 | 45592.0 |
| hypothetical protein | APR48_36965 | Not Available | Negative | 7914331 - 7915332 | 35337.5 |
| lysr family transcriptional regulator | APR48_36970 | Not Available | Positive | 7915418 - 7916362 | 34863.9 |
| tetr family transcriptional regulator | APR48_36975 | Not Available | Negative | 7916349 - 7917098 | 26922.4 |
| glutamate-1-semialdehyde 2,1-aminomutase | APR48_36980 | Not Available | Positive | 7917220 - 7918524 | 46144.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
