Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylalanine--trna ligase subunit beta | APR48_36885 | Not Available | Negative | 7897251 - 7899692 | 88323.2 |
| phenylalanine--trna ligase subunit alpha | APR48_36890 | Not Available | Negative | 7899756 - 7900832 | 40105.4 |
| 50s ribosomal protein l20 | APR48_36895 | Not Available | Negative | 7900949 - 7901272 | 12097.0 |
| hypothetical protein | APR48_36900 | Not Available | Negative | 7901441 - 7901665 | 8110.79 |
| hypothetical protein | APR48_36905 | Not Available | Negative | 7901724 - 7901993 | 9672.55 |
| Trna-asn | Not Available | Not Available | Positive | 7902360 - 7902435 | Not Available |
| tonb-dependent receptor | APR48_36915 | Not Available | Negative | 7902504 - 7904645 | 78661.2 |
| thiamine-phosphate diphosphorylase | APR48_36920 | Not Available | Negative | 7904657 - 7905550 | 31259.2 |
| thiazole synthase | APR48_36925 | Not Available | Negative | 7905622 - 7906437 | 29057.0 |
| thiamine biosynthesis protein this | APR48_36930 | Not Available | Negative | 7906461 - 7906658 | 7012.44 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
