Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short-chain dehydrogenase | APR48_02870 | Not Available | Negative | 620105 - 620857 | 25258.3 |
| branched-chain amino acid transferase | APR48_02875 | Not Available | Negative | 620854 - 621789 | 34502.3 |
| polyamine abc transporter permease | APR48_02880 | Not Available | Negative | 621786 - 622616 | 29521.8 |
| hypothetical protein | APR48_02885 | Not Available | Negative | 622636 - 623877 | 44404.2 |
| spermidine/putrescine abc transporter substrate-binding protein | APR48_02890 | Not Available | Negative | 623931 - 625001 | 39356.9 |
| transketolase | APR48_02895 | Not Available | Positive | 625235 - 626101 | 32102.4 |
| transketolase | APR48_02900 | Not Available | Positive | 626118 - 627128 | 35463.8 |
| hypothetical protein | APR48_02905 | Not Available | Negative | 627130 - 627801 | 23826.4 |
| prevent-host-death protein | APR48_02910 | Not Available | Negative | 627801 - 628148 | 12866.2 |
| amino acid transporter | APR48_02915 | Not Available | Negative | 628239 - 628484 | 8899.78 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
