Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s-transferase | APR48_36785 | Not Available | Negative | 7881560 - 7882438 | 32601.5 |
| glutathione s-transferase | APR48_36790 | Not Available | Positive | 7882467 - 7883099 | 23208.9 |
| acetyl-coa acetyltransferase | APR48_36795 | Not Available | Negative | 7883124 - 7884302 | 40155.7 |
| poly(r)-hydroxyalkanoic acid synthase | APR48_36800 | Not Available | Negative | 7884347 - 7886116 | 64851.2 |
| hypothetical protein | APR48_36805 | Not Available | Positive | 7886298 - 7886621 | 11482.2 |
| laccase | APR48_36810 | Not Available | Negative | 7886553 - 7887320 | 26519.4 |
| maleylacetoacetate isomerase | APR48_36815 | Not Available | Negative | 7887320 - 7887958 | 24024.7 |
| hypothetical protein | APR48_36820 | Not Available | Negative | 7887991 - 7888908 | 32912.4 |
| 5-carboxymethyl-2-hydroxymuconate isomerase | APR48_36825 | Not Available | Positive | 7889079 - 7889780 | 24971.8 |
| adp-ribose pyrophosphatase | APR48_36830 | Not Available | Positive | 7889802 - 7890353 | 20881.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
