Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l10 | APR48_36735 | Not Available | Negative | 7873674 - 7874207 | 18326.2 |
| 50s ribosomal protein l1 | APR48_36740 | Not Available | Negative | 7874506 - 7875204 | 23937.3 |
| 50s ribosomal protein l11 | APR48_36745 | Not Available | Negative | 7875205 - 7875636 | 15103.7 |
| antitermination protein nusg | APR48_36750 | Not Available | Negative | 7875774 - 7876268 | 18799.6 |
| preprotein translocase subunit sece | APR48_36755 | Not Available | Negative | 7876383 - 7876766 | 14020.2 |
| Trna-trp | Not Available | Not Available | Positive | 7876902 - 7876977 | Not Available |
| coa-transferase | APR48_36765 | Not Available | Negative | 7877189 - 7878370 | 42455.8 |
| acyl-coa dehydrogenase | APR48_36770 | Not Available | Negative | 7878399 - 7879286 | 32356.5 |
| laci family transcriptional regulator | APR48_36775 | Not Available | Negative | 7879306 - 7880307 | 34223.4 |
| lysr family transcriptional regulator | APR48_36780 | Not Available | Positive | 7880455 - 7881372 | 33310.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
