Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_36685 | Not Available | Negative | 7857188 - 7857841 | 25314.2 |
| Trna-phe | Not Available | Not Available | Positive | 7858508 - 7858583 | Not Available |
| xre family transcriptional regulator | APR48_36695 | Not Available | Negative | 7858667 - 7859368 | 25388.5 |
| histidine kinase | APR48_36700 | Not Available | Negative | 7859441 - 7861756 | 82856.4 |
| hypothetical protein | APR48_36705 | Not Available | Negative | 7861753 - 7862391 | 24000.0 |
| 16s rrna methyltransferase | APR48_36710 | Not Available | Negative | 7862372 - 7863697 | 48106.6 |
| lema family protein | APR48_36715 | Not Available | Negative | 7863814 - 7864434 | 21395.7 |
| dna-directed rna polymerase subunit beta' | APR48_36720 | Not Available | Negative | 7864571 - 7868800 | 154657.0 |
| dna-directed rna polymerase subunit beta | APR48_36725 | Not Available | Negative | 7868820 - 7872944 | 152744.0 |
| 50s ribosomal protein l7/l12 | APR48_36730 | Not Available | Negative | 7873246 - 7873623 | 12714.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
