Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | APR48_36635 | Not Available | Negative | 7848199 - 7848663 | 15743.7 |
| lysr family transcriptional regulator | APR48_36640 | Not Available | Negative | 7848816 - 7849748 | 34979.8 |
| hydroxyquinol 1,2-dioxygenase | APR48_36645 | Not Available | Positive | 7849911 - 7850786 | 31757.4 |
| hypothetical protein | APR48_36650 | Not Available | Positive | 7850816 - 7851421 | 22903.8 |
| permease | APR48_36655 | Not Available | Positive | 7851522 - 7852283 | 27258.5 |
| rna signal recognition particle 4.5s rna | APR48_36660 | Not Available | Negative | 7852300 - 7852659 | 13493.6 |
| transposase | APR48_36665 | Not Available | Negative | 7853143 - 7853481 | 12301.1 |
| hypothetical protein | APR48_36670 | Not Available | Negative | 7853478 - 7853789 | 11034.5 |
| hypothetical protein | APR48_36675 | Not Available | Positive | 7853900 - 7854160 | 9937.87 |
| appr-1-p processing protein | APR48_36680 | Not Available | Negative | 7856115 - 7857191 | 40292.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
