Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine--trna ligase subunit beta | APR48_36530 | Not Available | Negative | 7824991 - 7827123 | 75528.4 |
| glycine--trna ligase subunit alpha | APR48_36535 | Not Available | Negative | 7827139 - 7828047 | 34368.8 |
| alpha/beta hydrolase | APR48_36540 | Not Available | Negative | 7828261 - 7829111 | 30874.7 |
| exonuclease | APR48_36545 | Not Available | Negative | 7829108 - 7829671 | 20848.8 |
| transcriptional regulator | APR48_36550 | Not Available | Negative | 7829688 - 7831298 | 59619.3 |
| hypothetical protein | APR48_36555 | Not Available | Positive | 7831995 - 7833146 | 42516.8 |
| rna ligase | APR48_36560 | Not Available | Positive | 7833436 - 7834662 | 44703.6 |
| hypothetical protein | APR48_36570 | Not Available | Positive | 7835637 - 7836314 | 25129.3 |
| nucleotidyltransferase | APR48_36575 | Not Available | Positive | 7836342 - 7837220 | 32924.4 |
| rna 3'-phosphate cyclase | APR48_36580 | Not Available | Positive | 7837331 - 7838374 | 36555.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
