Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrate abc transporter substrate-binding protein | APR48_36430 | Not Available | Negative | 7801444 - 7802454 | 36138.1 |
| taurine dioxygenase | APR48_36435 | Not Available | Negative | 7802555 - 7803436 | 33535.9 |
| thiamine biosynthesis protein thic | APR48_36440 | Not Available | Negative | 7803641 - 7805471 | 67649.4 |
| hypothetical protein | APR48_36445 | Not Available | Negative | 7805721 - 7806167 | 16687.4 |
| hypothetical protein | APR48_36450 | Not Available | Negative | 7806235 - 7808094 | 66517.0 |
| luxr family transcriptional regulator | APR48_36455 | Not Available | Positive | 7808240 - 7808983 | 27864.3 |
| indole acetimide hydrolase | APR48_36460 | Not Available | Negative | 7808985 - 7810439 | 49316.6 |
| acyl-coa dehydrogenase | APR48_36465 | Not Available | Negative | 7810630 - 7811757 | 40143.9 |
| carboxypeptidase | APR48_36470 | Not Available | Negative | 7811789 - 7813036 | 43977.6 |
| acetyl-coa acetyltransferase | APR48_36475 | Not Available | Negative | 7813123 - 7814307 | 41007.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
