Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucoamylase | APR48_36380 | Not Available | Positive | 7791922 - 7793739 | 68104.0 |
| trehalose-6-phosphate synthase | APR48_36385 | Not Available | Positive | 7793736 - 7795121 | 52368.8 |
| hypothetical protein | APR48_36390 | Not Available | Negative | 7795131 - 7795508 | 13594.4 |
| 2-aminoadipate aminotransferase | APR48_36395 | Not Available | Positive | 7795708 - 7797171 | 54130.3 |
| rok family transcriptional regulator | APR48_36400 | Not Available | Negative | 7797173 - 7798099 | 32335.5 |
| hypothetical protein | APR48_36405 | Not Available | Negative | 7798132 - 7798326 | 7246.3 |
| histidinol phosphate phosphatase | APR48_36410 | Not Available | Negative | 7798336 - 7799112 | 27411.6 |
| hypothetical protein | APR48_36415 | Not Available | Positive | 7799268 - 7799666 | 14700.7 |
| abc transporter permease | APR48_36420 | Not Available | Negative | 7799673 - 7800542 | 31672.5 |
| sulfonate abc transporter atp-binding protein | APR48_36425 | Not Available | Negative | 7800539 - 7801351 | 30269.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
