Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_36330 | Not Available | Negative | 7781028 - 7781351 | 11316.4 |
| lysr family transcriptional regulator | APR48_36335 | Not Available | Positive | 7781530 - 7782513 | 36797.1 |
| 5-formyltetrahydrofolate cyclo-ligase | APR48_36340 | Not Available | Negative | 7782631 - 7783248 | 22993.7 |
| lytic transglycosylase | APR48_36345 | Not Available | Positive | 7783258 - 7785291 | 74853.1 |
| methyltransferase | APR48_36350 | Not Available | Positive | 7785293 - 7785871 | 20159.9 |
| glutathione s-transferase | APR48_36355 | Not Available | Positive | 7785985 - 7786668 | 25150.2 |
| hypothetical protein | APR48_36360 | Not Available | Negative | 7786715 - 7787440 | 25799.9 |
| phosphatase | APR48_36365 | Not Available | Positive | 7787607 - 7788866 | 46260.6 |
| histidine kinase | APR48_36370 | Not Available | Positive | 7789058 - 7790812 | 63700.3 |
| trehalose phosphatase | APR48_36375 | Not Available | Positive | 7790903 - 7791703 | 28297.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
