Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR48_02820 | Not Available | Negative | 610251 - 611324 | 37767.9 |
| hypothetical protein | APR48_02825 | Not Available | Positive | 611417 - 612100 | 25226.2 |
| hypothetical protein | APR48_02830 | Not Available | Negative | 612125 - 612334 | 7455.88 |
| hypothetical protein | APR48_02835 | Not Available | Positive | 612987 - 613343 | 13529.0 |
| aminotransferase | APR48_02840 | Not Available | Positive | 613657 - 615087 | 51271.4 |
| hypothetical protein | APR48_02845 | Not Available | Positive | 615084 - 616172 | 39424.9 |
| hypothetical protein | APR48_02850 | Not Available | Positive | 616182 - 616877 | 25976.2 |
| acetylpolyamine aminohydrolase | APR48_02855 | Not Available | Negative | 616891 - 617913 | 36629.2 |
| spermidine/putrescine abc transporter substrate-binding protein | APR48_02860 | Not Available | Negative | 617946 - 618989 | 38149.9 |
| acetylpolyamine aminohydrolase | APR48_02865 | Not Available | Negative | 619035 - 620072 | 37265.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
