Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| allantoate amidohydrolase | APR48_36230 | Not Available | Negative | 7760039 - 7761820 | 64935.9 |
| allantoinase | APR48_36235 | Not Available | Negative | 7761842 - 7762801 | 36719.4 |
| gntr family transcriptional regulator | APR48_36240 | Not Available | Negative | 7762813 - 7763487 | 24806.1 |
| 5-hydroxyisourate hydrolase | APR48_36245 | Not Available | Positive | 7763572 - 7763922 | 12523.8 |
| hypothetical protein | APR48_36250 | Not Available | Negative | 7763985 - 7764485 | 17973.4 |
| xanthine dehydrogenase | APR48_36255 | Not Available | Positive | 7764539 - 7765345 | 28701.7 |
| hypothetical protein | APR48_36260 | Not Available | Positive | 7765585 - 7766796 | 45403.3 |
| hydroxypyruvate reductase | APR48_36265 | Not Available | Positive | 7766861 - 7768213 | 46709.9 |
| aldehyde dehydrogenase | APR48_36270 | Not Available | Positive | 7768403 - 7769848 | 50565.7 |
| hypothetical protein | APR48_36275 | Not Available | Negative | 7770008 - 7770604 | 22351.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
