Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| long-chain fatty acid--coa ligase | APR48_36180 | Not Available | Negative | 7748796 - 7750478 | 61033.4 |
| peptide abc transporter | APR48_36185 | Not Available | Positive | 7750861 - 7751781 | 32820.1 |
| abc transporter permease | APR48_36190 | Not Available | Positive | 7751771 - 7752661 | 30631.4 |
| hypothetical protein | APR48_36195 | Not Available | Positive | 7752658 - 7753458 | 29256.9 |
| lysr family transcriptional regulator | APR48_36200 | Not Available | Negative | 7753763 - 7754683 | 33804.2 |
| abc transporter substrate-binding protein | APR48_36205 | Not Available | Positive | 7754840 - 7755730 | 31968.3 |
| aminotransferase | APR48_36210 | Not Available | Positive | 7755808 - 7757058 | 45671.7 |
| acetoacetate decarboxylase | APR48_36215 | Not Available | Positive | 7757156 - 7757932 | 27931.4 |
| hypothetical protein | APR48_36220 | Not Available | Positive | 7757943 - 7758794 | 30452.1 |
| peptidase m20 | APR48_36225 | Not Available | Negative | 7758798 - 7760033 | 44195.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
