Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H112 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1467019 bp
Thymine Count
1458316 bp
Guanine Count
3279006 bp
Cytosine Count
3286290 bp
Genome Length
9490631 bp
Protein-coding Genes
8333 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug abc transporter atp-binding protein | APR48_36130 | Not Available | Positive | 7737252 - 7739066 | 64870.3 |
| hypothetical protein | APR48_36135 | Not Available | Positive | 7739115 - 7740173 | 38301.7 |
| oxidoreductase | APR48_36140 | Not Available | Positive | 7740320 - 7741171 | 29320.3 |
| hypothetical protein | APR48_36145 | Not Available | Positive | 7741197 - 7741760 | 20823.9 |
| tetr family transcriptional regulator | APR48_36150 | Not Available | Negative | 7741767 - 7743020 | 45177.1 |
| acyl-coa dehydrogenase | APR48_36155 | Not Available | Positive | 7743277 - 7744509 | 45740.2 |
| short-chain dehydrogenase | APR48_36160 | Not Available | Positive | 7744533 - 7745297 | 27148.6 |
| acyl-coa dehydrogenase | APR48_36165 | Not Available | Positive | 7745309 - 7746511 | 44369.7 |
| acyl-coa dehydrogenase | APR48_36170 | Not Available | Positive | 7746552 - 7747679 | 39139.9 |
| aminoglycoside phosphotransferase | APR48_36175 | Not Available | Positive | 7747694 - 7748770 | 39641.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
